gmap

Module containing genetic map functionality.

Modules

pybrops.popgen.gmap.DenseGeneticMappableMatrix	Module implementing dense matrices that can have their variants placed on a genetic map and associated error checking routines.
pybrops.popgen.gmap.ExtendedGeneticMap	Module implementing a custom, extended genetic map format and associated error checking routines.
pybrops.popgen.gmap.GeneticMap	Module defining basal genetic map interfaces and associated error checking routines.
pybrops.popgen.gmap.GeneticMapFunction	Module defining basal genetic map function interfaces and associated error checking routines.
pybrops.popgen.gmap.GeneticMappableMatrix	Module defining interfaces and associated error checking routines for matrices that can have variant positions placed on a genetic map.
pybrops.popgen.gmap.HaldaneMapFunction	Module implementing the Haldane genetic map function and associated error checking routines.
pybrops.popgen.gmap.KosambiMapFunction	Module implementing the Kosambi genetic map function and associated error checking routines.
pybrops.popgen.gmap.StandardGeneticMap	Module implementing a standard genetic map format and associated error checking routines.
pybrops.popgen.gmap.util	Module containing miscellaneous genetic map subroutines.